Search
Product
About us
Contact
Blog

CovidMine

Names
More detailed information about this field from each metasource.

CovidMine
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

covidmine
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

Other names: covidmine

Names

More detailed information about this field from each metasource.

CovidMine

metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

covidmine

metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

CovidMine is an InterMine dedicated to COVID-19 / SARS-CoV-2 data which integrates confirmed Covid-19 cases, deaths, Sars-CoV-2 reference genome and nucleotide sequences from isolates deposited in Genbank

Description

More detailed information about this field from each metasource.

CovidMine is an InterMine dedicated to COVID-19 / SARS-CoV-2 data which integrates confirmed Covid-19 cases, deaths, Sars-CoV-2 reference genome and nucleotide sequences from isolates deposited in Genbank

metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

Webpage:

http://covid.apps.intermine.org/

Webpage

More detailed information about this field from each metasource.

http://covid.apps.intermine.org/

metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

Licence:

Name: LGPL-2.1

Licence name

More detailed information about this field from each metasource.

LGPL-2.1

metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

http://dx.doi.org/10.1093/bioinformatics/bts577

Tags:

Tags
More detailed information about this field from each metasource.

data visualisation
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

data integration and warehousing
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

data visualisation data integration and warehousing

More to explore:

1/20

NCBI SARS-CoV

This Web resource provides data and information relevant to SARS coronavirus. It includes links to the most recent sequence data and publications, to other SARS related resources, and a pre-computed a ...

InterMine

InterMine was formed in 2002 at the University of Cambridge, originally as a Drosophila-dedicated resource, before expanding to become organism-agnostic, enabling a large range of organisations around ...

An Ontology for Collection and Analysis of COviD-19 Data

This COVID-19 Ontology is a data model for publishing COVID-19 data on the Web as a Knowledge Graph. The primary focuses of the model are (1) COVID-19 cases: the data for COVID-19 cases (e.g., act ...

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Wales

The dataset provides information about SARS-CoV-2 variants of concern and variants under investigation in Wales. This includes phylogenetic and mutational information about samples.

COVID-19 Surveillance Ontology

The COVID-19 Surveillance Ontology is an application ontology used to support SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) surveillance in primary care. The ontology facilitates monit ...

TRACK-COVID

SARS-CoV-2 virus stimulates a rapid antibody response in people with symptomatic and asymptomatic infection. Seroprevalence of SARS-CoV-2 antibodies in a population can serve as a useful measure of ex ...

COVID-19 Data Portal

The COVID-19 Data Portal enables researchers to upload, access and analyse COVID-19 related reference data and specialist datasets. The aim of the COVID-19 Data Portal is to facilitate data sharing an ...

COVID-19 Ontology

The COVID-19 ontology covers the role of molecular and cellular entities in virus-host-interactions, in the virus life cycle, as well as a wide spectrum of medical and epidemiological concepts linked ...

COVID-19 SARI-Watch (formerly CHESS)

Data forming the COVID-19 SARI-Watch data set (formerly CHESS) relate to demographic, risk factor, treatment, & outcome information for patients admitted to hospital with a confirmed COVID-19 diagnosi ...

Covid-19 Thesaurus

This bilingual thesaurus (French-English), developed at Inist-CNRS, covers the concepts from the emerging COVID-19 outbreak which reminds the past SARS coronavirus outbreak and Middle East coronavirus ...

IBD Registry COVID-19

A consented IBD dataset of 9,800 participants, with a further 30,000 ethically-permissioned records for research related to COVID-19 and IBD. Includes patient demographics, medications plus vaccinatio ...

COVID-19 Consolidated Deaths (CDDS)

COVID-19 Consolidated Deaths dataset. Similar to the usual Annual deaths extract (SAIL Databank), except this dataset contains additional information with relevance to deaths where Covid-19 is attribu ...

Sars-CoV-2 Immunity & REinfection EvaluatioN (SIREN)

Large-scale study testing blood samples and swabs obtained from healthcare workers who work in a clinical setting to see if infection with COVID-19 protects them from future episodes of infection.

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Scotland

Summary of SARS-CoV-2 lineages and mutations

The COVID-19 Infectious Disease Ontology

The COVID-19 Infectious Disease Ontology (IDO-COVID-19) is an extension of the Infectious Disease Ontology (IDO) and the Virus Infectious Disease Ontology (VIDO). IDO Virus follows OBO Foundry guideli ...

UK Renal Registry - COVID-19 dataset

Patient-level data for adults and children with CKD or adults with an AKI on dialysis who are under the care of NHS hospital renal centres in England, Northern Ireland and Wales and who have a positiv ...

The National COVID-19 Chest Imaging Database

The National COVID-19 Chest Imaging Database is a joint collaboration between NHSX, BSTI and Royal Surrey NHS Foundation Trust to create a centralised UK database of X-Ray, CT and MRI images from hosp ...

Covid-19 Tests

Covid 19 Test Results

Lighthouse

Lighthouse laboratories [high-throughput facilities dedicated to COVID-19]

Early Pandemic Evaluation and Enhanced Surveillance of COVID-19 (EAVE II)

Population-level surveillance and rapid assessment of the effectiveness of therapeutic or preventive interventions are required to ensure that interventions are targeted to those at highest risk of se ...

Previous Next

Need help integrating and/or managing biomedical data?

Follow our Twitter for updates

Service status

Reach us:
[email protected]

Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine

CovidMine Names More detailed information about this field from each metasource. × CovidMine metasource: bio.tools version: extracted_at: 2022-11-04T11:26:57.432616 covidmine metasource: bio.tools version: extracted_at: 2022-11-04T11:26:57.432616 Close

Webpage:

Licence:

Publications: Publications More detailed information about this field from each metasource. × http://dx.doi.org/10.1093/bioinformatics/bts577 metasource: bio.tools version: extracted_at: 2022-11-04T11:26:57.432616 Close

Tags: Tags More detailed information about this field from each metasource. × data visualisation metasource: bio.tools version: extracted_at: 2022-11-04T11:26:57.432616 data integration and warehousing metasource: bio.tools version: extracted_at: 2022-11-04T11:26:57.432616 Close

More to explore:

1/20

NCBI SARS-CoV

InterMine

An Ontology for Collection and Analysis of COviD-19 Data

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Wales

COVID-19 Surveillance Ontology

TRACK-COVID

COVID-19 Data Portal

COVID-19 Ontology

COVID-19 SARI-Watch (formerly CHESS)

Covid-19 Thesaurus

IBD Registry COVID-19

COVID-19 Consolidated Deaths (CDDS)

Sars-CoV-2 Immunity & REinfection EvaluatioN (SIREN)

SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Scotland

The COVID-19 Infectious Disease Ontology

UK Renal Registry - COVID-19 dataset

The National COVID-19 Chest Imaging Database

Covid-19 Tests

Lighthouse

Early Pandemic Evaluation and Enhanced Surveillance of COVID-19 (EAVE II)

CovidMine

Names
More detailed information about this field from each metasource.

CovidMine
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

covidmine
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1093/bioinformatics/bts577
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

Tags:

Tags
More detailed information about this field from each metasource.

data visualisation
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616

data integration and warehousing
metasource: bio.tools
version: extracted_at: 2022-11-04T11:26:57.432616